Sunday, August 7, 2011

K=6 STRUCTURE run: futher remarks

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To make more sense of STRUCTURE results i've made a quick STRUCTURE analysis (of the same dataset, but this time on the whole set witho...
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Tuesday, August 2, 2011

K=6 STRUCTURE run: results for participants V157-V222

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I've recently finished STRUCTURE analysis for the participants V157-V222. The fixing of STRUCTURE problems for the whole set of genomic ...
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Monday, July 11, 2011

STRUCTURE results: to be published soon

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The co-admin of  the MDL project, Leon (of HIRSearch ) has managed to get STRUCTURE to work with the whole MDL dataset on one of his servers...
Friday, July 1, 2011

A close-up on "the core" of the MDL project

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The PCA and MDS plots fleshed out very stable clusters of what appears to be the core of the MDLP projects. I would label these clusters aft...

ADMIXTURE results for all participants up to V222

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Dienekes was kind enough to share his C++ code for converting the 1000 genomes dataset   to PLINK format. Since many participants of our pro...
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Sunday, June 26, 2011

SNP Map application: a new genomic toy

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Smallaxe of DNA-forums.com has created a platform for developing tools to help exploring RAW data files. Basically it is useful for identify...
Tuesday, June 14, 2011

Interpretome -personal genome analysis webservice

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David of Eurogenes blog and Zack of Harappa DNA project have posted a link to a  very promising  personal genome analysis webservice Interpr...
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